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1.
Medicina (B.Aires) ; 81(1): 111-114, mar. 2021. graf
Article in Spanish | LILACS | ID: biblio-1287250

ABSTRACT

Resumen La leucemia/linfoma a células T del adulto (ATLL) es una enfermedad hematológica causada por el virus linfotrópico T humano tipo 1 (HTLV-1) que se desarrolla luego de 20 años de incubación, preferencialmente cuando la infección se adquiere por transmisión vertical. Este tiempo se reduce de 3 meses a 3 años cuando la transmisión del virus es por transfusión o trasplante de órganos. La ATLL aguda es de difícil diagnóstico por ser inusual y tener una rápida progresión a la muerte. En el Noroeste argentino, donde el virus es endémico, la ATLL es más frecuente, sin embargo, también se la detecta continuamente en el resto del país. El tratamiento de elección, en primera instancia, es el uso combinado de antivirales. Presentamos un caso de ATLL aguda desarrollada en un hombre de 59 años de Santiago del Estero a partir del cual se identificó transmisión intrafamiliar de la infección por HTLV-1.


Abstract Adult T-cell leukemia/lymphoma (ATLL) is an hematological disease caused by human T-cell lymphotropic virus type 1 (HTLV-1) that develops after 20 years of incubation preferentially when the infection is acquired by vertical transmission. In cases of transmission by transfusion or organ transplant, this time is reduced from 3 months to 3 years. Acute ATLL is difficult to diagnose because it is unusual and has a rapid progression to death. In the Argentine Northwest, where the virus is endemic, ATLL is more frequent, however it is also detected continuously in the rest of the country. The treatment of choice, in the first instance, is the combined use of antivirals. We present a case of acute ATLL developed in a 59-year-old man from Santiago del Estero from which intrafamilial transmission of HTLV-1 infection was identified.


Subject(s)
Humans , Male , Adult , Middle Aged , Human T-lymphotropic virus 1/genetics , HTLV-I Infections/diagnosis , Leukemia-Lymphoma, Adult T-Cell/diagnosis , T-Lymphocytes
2.
Rev. Soc. Bras. Med. Trop ; 54: e20200066, 2021. tab, graf
Article in English | SES-SP, ColecionaSUS, LILACS | ID: biblio-1136919

ABSTRACT

Abstract INTRODUCTION: We investigated the prevalence of human T-cell lymphotropic virus types 1 and 2 (HTLV-1/2) infection in patients with hematological diseases from the western Amazon region of Brazil. METHODS: Samples from 306 patients were submitted for the molecular diagnosis of HTLV-1/2 infection by real time PCR (qPCR), with amplification, sequencing, and phylogenetic analysis of the long terminal repeat (LTR) region. RESULTS: A 29-year-old male carrier of sickle cell anemia with a history of multiple blood transfusions was diagnosed with the HTLV-2c subtype. CONCLUSIONS: This study describes the first known occurrence of HTLV-2c in the urban area of Brazil's western Amazon region.


Subject(s)
Humans , Male , Pregnancy , Adult , Human T-lymphotropic virus 1/genetics , HTLV-I Infections/diagnosis , HTLV-I Infections/epidemiology , HTLV-II Infections/diagnosis , HTLV-II Infections/epidemiology , Phylogeny , Brazil/epidemiology , Human T-lymphotropic virus 2/genetics
3.
Braz. j. infect. dis ; 25(5): 101631, 2021. tab, graf
Article in English | LILACS | ID: biblio-1350325

ABSTRACT

ABSTRACT Introduction: Brazil has a high number of HTLV-1/2 infections which are unequally distributed in the country. Most prevalence studies have focused on specific populations, such as blood donors and pregnant women. Some areas, for example the state of Bahia, have robust information about HTLV-1/2 infection, however there is no information available about this infection in the general population of Vitoria, Espírito Santo, Brazil. Objective: To determine the prevalence of HTLV-1/2 infection in adults from the municipality of Vitoria, ES. Methods: A cross sectional study was performed from September 2010 to December 2011, in individuals of both sexes, aged 18 or older living in Vitoria-ES. Venous blood samples were collected and tested for anti-HTLV-1/2 antibodies by chemiluminescent immunoassay (CMIA). Individuals with CMIA reactive results were submitted to a new blood collection for retesting by CMIA, followed by PCR to confirm infection and discriminate the viral type. Results: From 1502 tested samples, eight were reactive in CMIA and all were confirmed by PCR. Therefore, the prevalence of HTLV-1/2 was 0.53% (8/1502, 95% CI: 0.2-1.0%). The infection rate was 0.7% in men (5/711, 95% CI: 0.17-1.51%), and 0.38% in women (3/791, 95% CI: 0 -0.81%). Conclusions: The prevalence of HTLV-1/2 infection was 0.53% (8/1502; 95% CI: 0.2 -0.9%). Confirmatory test using real-time PCR (qPCR) identified seven individuals positive for HTLV-1 and one for HTLV-2. Considering the risk of infected individuals to develop high morbidity and mortality diseases, it would be important to implement public health policies aimed at stopping transmission of these viruses in this municipality. 2021 Sociedade Brasileira de Infectologia. Published by Elsevier España, S.L.U. This is an open access article under the CC BY-NC-ND license


Subject(s)
Humans , Male , Female , Pregnancy , Adult , Human T-lymphotropic virus 1/genetics , HTLV-I Infections/epidemiology , HTLV-I Infections/diagnostic imaging , Human T-lymphotropic virus 2/genetics , HTLV-II Infections/diagnosis , Brazil/epidemiology , T-Lymphocytes , Prevalence , Cross-Sectional Studies , Real-Time Polymerase Chain Reaction
4.
Rev. Soc. Bras. Med. Trop ; 53: e20200026, 2020. tab
Article in English | SES-SP, ColecionaSUS, LILACS | ID: biblio-1136800

ABSTRACT

Abstract INTRODUCTION: The human T-lymphotropic virus type 1 (HTLV-1) has a single-stranded RNA genome and expresses specific proteins that have oncogenic potential. Approximately 15 to 20 million people worldwide have been infected by this virus. Changes in protein or gene expression are the effects of single nucleotide polymorphisms (SNPs) within the Toll-like receptor 3 (TLR3) gene. The function and efficacy of signal transduction also lead to modified immune responses. The present study aimed to investigate the association of SNPs within TLR3 (rs3775291 and rs3775296) with susceptibility to HTLV-1 infection in Iranian asymptomatic blood donors. METHODS: This study was performed on 100 HTLV-1-infected asymptomatic blood donors and 118 healthy blood donors. Genomic DNA from all participants was purified and then amplified using specific PCR primers. SNPs within TLR3 were evaluated using the restriction fragmentation length polymorphism technique, and the results were analyzed using SPSS software (version 22). RESULTS: The frequencies of the TLR3 (rs3775296) CC, CA, AA genotypes were 70%, 24%, and 6% in the patient group, and 50.8%, 44.9%, and 4.2% in the control group, respectively. There was a significant difference in the frequency distribution of TLR3 (rs3775296) genotypes and alleles, but not in the frequency distribution of TLR3 (rs3775291) genotypes between the patient and control groups. CONCLUSIONS: The TLR3 SNP rs3775296 was significantly associated with HTLV-1 infection and may be a protective factor against this viral infection.


Subject(s)
Humans , Male , Female , Adult , Blood Donors/statistics & numerical data , Human T-lymphotropic virus 1/genetics , HTLV-I Infections/genetics , Polymorphism, Single Nucleotide/genetics , Toll-Like Receptor 3/genetics , HTLV-I Infections/diagnosis , Case-Control Studies , Genetic Predisposition to Disease , Genotype , Iran , Middle Aged
5.
Rev. argent. microbiol ; 51(4): 307-315, dic. 2019. graf
Article in Spanish | LILACS | ID: biblio-1057394

ABSTRACT

Resumen Se realizó un estudio epidemiológico molecular en una población de 9.422 donantes de sangre de la provincia de Corrientes (noreste de Argentina), con el fin de determinar la prevalencia del virus linfotrópico T del humano tipos 1 y 2 (human T-cell lymphotropic virus: HTLV-1/2), de identificar filogenéticamente a los subtipos/subgrupos de HTLV-1 y 2 encontrados y de realizar el análisis de mutaciones. Sobre la base de los resultados obtenidos, se demostró que tanto el HTLV-1 como el HTLV-2 se encuentran circulando en una población de bajo riesgo de Corrientes, si bien con una prevalencia similar a las de áreas no endémicas. Los estudios filogenéticos identificaron al subtipo Cosmopolita subgrupo Transcontinental (Aa) del HTLV-1 y al subtipo b del HTLV-2. Los donantes infectados no manifestaron antecedentes de riesgo tales como transfusiones, uso de drogas inyectables ni parejas sexuales de riesgo o seropositivas para HTLV-1/2. Estos resultados indican que estos virus fueron transmitidos de madre a hijo, posiblemente de generación en generación, y que estas cepas fueron introducidas en la población caucásica de esta región a partir de ascendientes originarios de áreas endémicas del país o por contacto producido tiempo atrás con individuos infectados de otros países. Nuestros resultados demuestran por primera vez la presencia de HTLV-1 y HTLV-2 en la provincia de Corrientes. Y si bien se puede considerar a esta provincia como área no endémica, se destaca la necesidad de incluir a estos retrovirus en un programa nacional de salud pública, con el fin de contar con profesionales capacitados para realizar su diagnóstico y brindar la información necesaria en relación con la atención primaria y el seguimiento de los pacientes.


Abstract A molecular epidemiological study was conducted in a population of 9422 blood donors in the province of Corrientes, Northeastern Argentina, to determine the prevalence of Human T-cell lymphotropic virus types 1 and 2 (HTLV-1/2), the phylogenetic identification of HTLV-1 and 2 subtypes/subgroups and perform a mutation analysis. Based on the results obtained, it was shown that both HTLV-1 and HTLV-2 are circulating in a low-risk population of Corrientes, although with a similar prevalence to that of non-endemic areas. Phylogenetic studies identified the HTLV-1 Cosmopolitan subtype Transcontinental subgroup (Aa), and the HTLV-2 subtype b. Infected donors reported neither a history of risk factors such as transfusions, intravenous drug use, nor risky or HTLV-1/2 seropositive sexual partners. These results suggest that these viruses were transmitted from mother to child, possibly from generation to generation, and that these strains were introduced into the Caucasian population of this region from ancestors originating from endemic areas of the country either from or through contact with individuals from other countries years ago. Our results demonstrate for the first time the presence of HTLV-1 and HTLV-2 in the province of Corrientes. Moreover, although the province can be considered a non-endemic area, the need to include these retroviruses in a national Public Health program is highlighted, in order to have qualified professionals duly trained to make their diagnosis and provide the necessary information in relation to primary care and patient follow-up.


Subject(s)
Humans , Male , Female , Human T-lymphotropic virus 1/genetics , Human T-lymphotropic virus 2/genetics , Argentina/epidemiology , Blood Donors , DNA Mutational Analysis/methods , Epidemiologic Studies , Prevalence
6.
Braz. j. infect. dis ; 22(6): 472-476, Nov.-Dec. 2018. tab, graf
Article in English | LILACS | ID: biblio-984015

ABSTRACT

ABSTRACT Human T cell lymphotropic virus type 1 (HTLV-1) was the first retrovirus discovered in humans and is endemic in several parts of the world. Because of risk behaviors, mainly sexual, men who have sex with men (MSM) are at high risk of acquiring HTLV-1 infection. A cross-sectional study was performed to estimate the prevalence of HTLV-1 infection, to characterize genetically HTLV-1 sequences and to identify risk behaviors associated with this infection among MSM in Central Brazil. A total of 430 MSM were enrolled in this study and three were shown to be HTLV-1 infected, prevalence of 0.7% (95% confidence interval: 0.4-0.9). Phylogenetic analysis showed that all HTLV-1 positive samples belonged to Cosmopolitan subtype Transcontinental subgroup A. Although the prevalence rate of HTLV-1 infection found in this study was similar to that observed among Brazilian blood donors, additional HTLV-1 preventive interventions need to be further implemented because this population is engaged in high-risk sexual behavior.


Subject(s)
Humans , Male , Adult , Middle Aged , Aged , Young Adult , Human T-lymphotropic virus 1/genetics , HTLV-I Infections/epidemiology , Homosexuality, Male/statistics & numerical data , Phylogeny , Brazil/epidemiology , HTLV-I Infections/diagnosis , HTLV-I Infections/transmission , Prevalence , Cross-Sectional Studies , Risk Factors , Sexual and Gender Minorities
7.
Rev. bras. epidemiol ; 21: e180018, 2018. tab, graf
Article in Portuguese | LILACS | ID: biblio-958832

ABSTRACT

RESUMO: Introdução: A disseminação da infecção pelo vírus linfotrópico-T humano (HTLV) em famílias da área metropolitana de Belém, Pará, Brasil, e a ausência de estudos na população em geral requisitam investigações que esclareçam melhor a sua prevalência na região. Metodologia: Foi realizada pesquisa de anticorpos anti-HTLV-1/HTLV-2 em indivíduos adultos transeuntes de logradouros públicos de Belém, entre novembro de 2014 e novembro de 2015. A infecção foi confirmada por pesquisa de DNA proviral e foi realizada avaliação clínica e investigação intrafamiliar dos infectados. Resultados: Dos 1.059 indivíduos investigados, 21 (2,0%) apresentaram amostras sororeagentes, 15 (1,4%) confirmados para HTLV-1, 5 (0,5%) para HTLV-2 e o DNA proviral foi indetectável em 1 caso. A média de idade dos infectados (57,2) foi maior que a dos não infectados (46,2) (p = 0,0010). A infecção aumentou com a idade e se destacou nos indivíduos com renda familiar menor ou igual a um salário mínimo. A transmissão intrafamiliar parece ter ocorrido em todas as famílias investigadas. Dentre os portadores de HTLV-1, 30% (3/10) já apresentavam algum sintoma relacionado à infecção. Discussão: O aumento da infecção de acordo com a idade pode ocorrer por soroconversão tardia de infecção pré-adquirida ou pelo risco cumulativo de novas infecções, sobretudo em mulheres. Conclusão: A infecção por HTLV demonstrou moderada prevalência na população estudada, com predomínio do HTLV-1. Essa mostrou-se associada à baixa renda e ao aumento da idade das mulheres. Também apresentou disseminação intrafamiliar e negligência no diagnóstico das doenças associadas.


ABSTRACT: Introduction: The spread of the HTLV infection in families living in the metropolitan area of Belém, Pará, Brazil, and the lack of studies in the general population requires studies to better understand its prevalence in the region. Methods: An anti-HTLV-1/HTLV-2 antibodies test was carried out on random adults in public places in Belém between November 2014 and November 2015. A proviral DNA test detected if the person was infected, and then a clinical evaluation and an intrafamilial investigation were carried out. Results: Of the 1059 individuals being investigated, 21 (2.0%) had seroreagent samples, 15 (1.4%) had HTLV-1, 5 (0.5%) had HTLV-2, and proviral DNA was undetectable in one case. The mean age of the infected people (57.2) was higher than that of those that were uninfected (46.2) (p = 0.0010). The prevalence of infection increased with age, especially in individuals with a family income equal to or less than a minimum wage. Intrafamilial transmission seems to have occurred in all of the families being studied. Among the patients with HTLV-1, 30% (3/10) already had some symptom related to the infection. Discussion: The increase in prevalence rates according to age may be due to late seroconversion of a previously acquired infection, or the cumulative risk of new infections, especially in women. Conclusion: There was a moderate prevalence of the HTLV infection among adult individuals from the metropolitan area of Belém, with a predominance of HTLV-1. This infection was associated with low income and increasingly older women. It also presented intrafamily spread and negligence in the diagnosis of associated diseases.


Subject(s)
Humans , Adolescent , Adult , Aged , Aged, 80 and over , Young Adult , Deltaretrovirus Infections/epidemiology , Socioeconomic Factors , Urban Population , Brazil/epidemiology , DNA, Viral/blood , Human T-lymphotropic virus 1/genetics , Human T-lymphotropic virus 1/immunology , HTLV-I Antibodies/blood , Human T-lymphotropic virus 2/genetics , Human T-lymphotropic virus 2/immunology , HTLV-II Antibodies/blood , Deltaretrovirus Infections/diagnosis , Prevalence , Cross-Sectional Studies , Prospective Studies , Endemic Diseases , Middle Aged
8.
Mem. Inst. Oswaldo Cruz ; 111(9): 594-596, Sept. 2016. graf
Article in English | LILACS | ID: lil-794725

ABSTRACT

We characterised and reported the first full-length genomes of Human T-cell Lymphotropic Virus Type 1 subgroup HTLV-1aD (CV21 and CV79). This subgroup is one of the major determinants of HTLV-1 infections in North and West Africa, and recombinant strains involving this subgroup have been recently demonstrated. The CV21 and CV79 strains from Cape Verde/Africa were characterised as pure HTLV-1aD genomes, comparative analyses including HTLV-1 subtypes and subgroups revealed HTLV-1aD signatures in the envelope, pol, and pX regions. These genomes provide original information that will contribute to further studies on HTLV-1a epidemiology and evolution.


Subject(s)
Humans , Genome-Wide Association Study , Human T-lymphotropic virus 1/genetics , Cabo Verde , Phylogeny
9.
Biomédica (Bogotá) ; 35(3): 337-346, jul.-sep. 2015. graf, tab
Article in English | LILACS | ID: lil-765462

ABSTRACT

Introduction: To date there has been no statistical evaluation of the profiles of immunoglobulin classes and viral replication as variables in the study of HTLV-1 infection and circulation among families in virus-endemic areas of Colombia. Objective: To evaluate the correlation of several immunological and molecular characteristics with the transmission and circulation of HTLV-1 among families in the town of Tumaco. Materials and methods: Plasma levels of HTLV-1 specific immunoglobulin classes IgG, IgM and IgA1, as well as IgG and sIgA in oral fluids, were calculated for 32 members of 10 family groups from Tumaco in which the mother and at least one child were infected with the virus. Levels of the different immunoglobulin classes were correlated with viral RNA circulating in plasma or oral fluids and the proviral burden as detected by RT-PCR. Results: Significant differences were determined between mothers and carrier children for immunoglobulin levels (p=0.037) and proviral burden (p=0.002). The overall estimate of IgG in plasma and sIgA in oral fluids could be correlated with the circulation of free viral RNA in both fluids and high proviral burden, and associated with HAM/TSP mothers. The detection of anti- tax IgG in plasma revealed differences between HAM/TSP mothers and their offspring. Conclusion: The study of immunological and molecular variables permitted the analysis of HTLV-1 circulation among families of Tumaco. The strong correlation between levels of IgM specific for the virus and viral RNA circulating in fluids indirectly confirmed the transmission of HTLV-1 among families.


Introducción. Todavía no hay una evaluación estadística de los perfiles de las clases de inmuno- globulina s y la replicación viral, como variables para estudiar la infección y la circulació n del HTLV-1 en familias de zonas endémicas en Colombia. Objetivo. Evaluar la correlación de varias características inmunológicas y moleculares, con la transmisión y circulación del virus en familias del municipio de Tumaco. Materiales y métodos. Se calcularon los niveles de IgG, IgM e IgA1 en plasma, e IgG y IgA secretoria en fluido oral, de 32 miembros de 10 grupos familiares de Tumaco, en los que la madre y, al menos, un hijo estaban infectados con el virus. La concentración de las diferentes clases de inmunoglobulinas se pudo correlacionar con la circulación de ARN viral libre en plasma y fluido oral, y la carga proviral, según su detección mediante reacción en cadena de la polimerasa de transcripción inversa. Resultados. Se encontraron diferencias significativas en los niveles de inmunoglobulinas (p=0,037) y en la carga proviral (p=0,002) entre madres e hijos portadores. La estimación total de IgG en plasma e IgA secretoria en fluido oral, se pudo correlacionar con la circulación de ARN viral libre en ambos fluidos y una alta carga proviral, y se asoció con las madres paraparesia espástica tropical o mielopatía asociada con el HTLV-1. La detección en plasma de IgG anti-Tax reveló diferencias entre ellas y sus hijos. Conclusión. El estudio de las variables inmunológicas y moleculares permitió analizar la circulación del HTLV-1 en familias de Tumaco. La fuerte asociación entre los niveles de IgM específica para el virus y el ARN viral circulante en los fluidos y la carga proviral, confirmó indirectamente la transmisión intrafamiliar del virus.


Subject(s)
Adolescent , Adult , Child , Child, Preschool , Female , Humans , Male , Middle Aged , Young Adult , RNA, Viral/analysis , Human T-lymphotropic virus 1/isolation & purification , HTLV-I Antibodies/analysis , HTLV-I Infections/epidemiology , Family Health , Viremia/immunology , Viremia/epidemiology , Viremia/virology , Breast Feeding/adverse effects , RNA, Viral/blood , Human T-lymphotropic virus 1/genetics , Human T-lymphotropic virus 1/immunology , HTLV-I Antibodies/blood , HTLV-I Infections/immunology , HTLV-I Infections/transmission , HTLV-I Infections/virology , Seroepidemiologic Studies , Cross-Sectional Studies , Proviruses/isolation & purification , Colombia/epidemiology , Infectious Disease Transmission, Vertical , Endemic Diseases , Mothers
10.
Brasília; CONITEC; 2015. tab.
Monography in Portuguese | LILACS, BRISA | ID: biblio-859357

ABSTRACT

INTRODUÇÃO: O HTLV é um retrovírus descoberto em 1981 que possui as mesmas vias de transmissão do HIV e apresenta prevalência variada mundialmente. No Brasil estudos com gestantes e doadores em bancos de sangue refletem uma baixa prevalência do HTLV, segundo própria classificação do vírus em termos de prevalência, na população (entre 0,1-1%). Dos pacientes infectados pelo vírus, 90% permanecerão assintomáticos por toda vida. Em relação à leucemia/linfoma associada aos portadores de HTLV as taxas variam entre 1 a 5%. A medicação AZT encontra-se incorporada no SUS para uso terapêutico de Pessoas vivendo com HIV/Aids (PVHA), a indicação do uso desse medicamento para pacientes acometidos pela leucemia/linfoma associado ao HTLV não está contemplada no SUS. No entanto é constatada demanda de todas as partes do Brasil no que se refere à liberação do AZT para esse fim. Anteriormente não constavam trabalhos científicos que dessem embasamento para o uso do AZT no tratamento da leucemia/linfoma associado ao HTLV. Realizava-se a solicitação da liberação do AZT diretamente para o Ministério da Saúde e a liberação era realizada em formato de parecer individualizado. A leucemia/linfoma associada ao HTLV-1 é um evento raro e de prognóstico reservado, porém no momento atual trabalhos relacionados ao tema mostram que terapia antiviral com zidovudina e alfainterferona é eficaz na forma leucêmica da doença, com aumento significativo na sobrevida livre de progressão quando comparado ao uso da quimioterapia. A forma linfomatosa se beneficia do uso associado da quimioterapia com os antivirais. A demanda para utilização do AZT como tratamento para leucemia/linfoma associada ao HTLV- 1 é baixa, já que o acometimento da doença citada é um evento raro. EVIDÊNCIAS CIENTÍFICAS: Os trabalhos científicos selecionados para dar subsídio à solicitação da incorporação do medicamento AZT para tratamento de leucemia/linfoma associado ao HTLV-1 demonstraram aumento importante na sobrevida dos indivíduos tratados com antirretroviral exclusivamente ou associado à quimioterapia nos casos linfomatosos quando comparados ao tratamento apenas com quimioterapia, mostrando ser essa terapêutica eficaz para todas as formas de leucemias/linfomas associados ao HTLV-1. Em relação à segurança, os trabalhos avaliaram como sendo seguro o uso de AZT para a população em questão. Os estudos selecionados incluem série de casos, estudos retrospectivos e prospectivos. Abaixo segue tabela 1 com referências principais sobre o uso do AZT para tratamento de leucemia/linfoma associado ao HTLV-1. CONCLUSÃO: A solicitação da incorporação da zidovudina para uso no tratamento de leucemia/linfoma associado ao HTLV-1 tem como base trabalhos que demostram diferença no prognóstico dos pacientes que fizeram uso da zidovudina. Na prática clínica a utilização do AZT, nesses casos, encontra barreira burocrática na liberação da medicação pela incompatibilidade entre a indicação e o registro. Nos últimos anos os trabalhos relacionados ao tema surgiram e dão sustentação para a solicitação da incorporação em questão. Com o intuito de atualizar e sincronizar Ministério da Saúde e a prática clínica baseada em evidência, a Secretaria de Vigilância em Saúde (SVS/MS) solicitou a avaliação da incorporação do AZT para esta condição pela CONITEC. Mesmo sendo a leucemia/linfoma associada ao HTLV-1 um evento menos frequente na população, existem brasileiros em tratamento para essa patologia e que, para os quais, a liberação do AZT traz mudança nos seus prognósticos. DELIBERAÇÃO FINAL: Os membros da CONITEC presentes na reunião do plenário do dia 05/08/2015 deliberaram, por unanimidade, recomendar a incorporação do antirretroviral zidovudina para uso no tratamento de leucemia/linfoma de células T associado ao HTLV- 1 conforme Protocolo Clínico e Diretrizes Terapêuticas do Ministério da Saúde. Foi assinado o Registro de Deliberação nº 135/2015. DECISÃO: Portaria nº 50, de 29 de setembro de 2015 - Torna pública a decisão de incorporar no âmbito do Sistema Único de Saúde-SUS o antirretroviral zidovudina para uso no tratamento de leucemia/linfoma de células T associado ao HTLV-1, conforme Protocolo do Ministério da Saúde.


Subject(s)
Humans , Adult , Anti-Retroviral Agents , Human T-lymphotropic virus 1/genetics , Leukemia-Lymphoma, Adult T-Cell/drug therapy , Zidovudine/administration & dosage , Brazil , Technology Assessment, Biomedical , Treatment Outcome , Unified Health System
11.
Mem. Inst. Oswaldo Cruz ; 109(7): 957-960, 11/2014. tab
Article in English | LILACS | ID: lil-728799

ABSTRACT

Inter-individual heterogeneity in the response to human T-lymphotropic virus 1 (HTLV-1) infection has been partially attributed to host genetic background. The antiviral activity of the inflammasome cytoplasmic complex recognises viral molecular patterns and regulates immune responses via the activation of interleukin (IL)-1 family (IL-1, IL-18 and IL-33) members. The association between polymorphisms in the inflammasome receptors NLRP1 and NLRP3 and HTLV-1 infection was evaluated in a northeastern Brazilian population (84 HTLV-1 carriers and 155 healthy controls). NLRP3 rs10754558 G/G was associated with protection against HTLV-1 infection (p = 0.012; odds ratio = 0.37). rs10754558 affects NLRP3 mRNA stability; therefore, our results suggest that higher NLRP3 expression may augment first-line defences, leading to the effective protection against HTLV-1 infection.


Subject(s)
Humans , Male , Female , Adult , Middle Aged , Carrier Proteins/genetics , HTLV-I Infections/immunology , Human T-lymphotropic virus 1/genetics , Polymorphism, Single Nucleotide/genetics , Brazil , Carrier Proteins/metabolism , Genetic Predisposition to Disease , HTLV-I Infections/genetics , Inflammasomes/immunology , Interleukin-1/metabolism , Protective Factors
12.
Mem. Inst. Oswaldo Cruz ; 109(4): 448-451, 03/07/2014. tab, graf
Article in English | LILACS | ID: lil-716298

ABSTRACT

Human T-cell lymphotropic virus type 1 (HTLV-1) is mainly associated with two diseases: tropical spastic paraparesis/HTLV-1-associated myelopathy (TSP/HAM) and adult T-cell leukaemia/lymphoma. This retrovirus infects five-10 million individuals throughout the world. Previously, we developed a database that annotates sequence data from GenBank and the present study aimed to describe the clinical, molecular and epidemiological scenarios of HTLV-1 infection through the stored sequences in this database. A total of 2,545 registered complete and partial sequences of HTLV-1 were collected and 1,967 (77.3%) of those sequences represented unique isolates. Among these isolates, 93% contained geographic origin information and only 39% were related to any clinical status. A total of 1,091 sequences contained information about the geographic origin and viral subtype and 93% of these sequences were identified as subtype “a”. Ethnicity data are very scarce. Regarding clinical status data, 29% of the sequences were generated from TSP/HAM and 67.8% from healthy carrier individuals. Although the data mining enabled some inferences about specific aspects of HTLV-1 infection to be made, due to the relative scarcity of data of available sequences, it was not possible to delineate a global scenario of HTLV-1 infection.


Subject(s)
Adult , Female , Humans , Male , HTLV-I Infections/epidemiology , HTLV-I Infections/virology , Human T-lymphotropic virus 1/genetics , Base Sequence , Data Mining , Databases, Nucleic Acid , Geography, Medical , Global Health , Molecular Epidemiology , User-Computer Interface
13.
Rev. méd. Chile ; 142(3): 314-322, mar. 2014. ilus, tab
Article in Spanish | LILACS | ID: lil-714355

ABSTRACT

Background: Human T-lymphotropic virus-1 (HTLV-1) infection has been associated with the pathogenesis of cutaneous T cell lymphomas (CTCL). Aim: To search for HTLV-1 DNA in skin biopsies of patients with CTCL. Material and Methods: A retrospective study was conducted using 25 biopsies of patients with CTCL. DNA was extracted from lymphoid tissue by microdissection. A nested PCR was conducted to detect HTLV-1 genome using primers for the tax region. As negative controls, four cases of superficial perivascular dermatitis were chosen. As positive controls, five cases of T-cell leukemia/lymphoma (ATCL) were studied. Results: A positive reaction was found in 3 of 25 cases. These biopsies corresponded to a case of Mycosis Fungoides, a case of CD30 (-) T-cell lymphoma and a case of lymphomatoid papulosis. Search was negative in the four cases of superficial perivascular dermatitis and positive in four cases of adult T-cell leukemia/lymphoma (ATCL). Conclusions: HTLV-1 DNA search in tissues is a useful tool recommended to study T-cell lymphomas. HTLV-1 infection only occurs in sporadic cases but may contribute to tumor aggressiveness and prognosis.


Subject(s)
Adult , Aged , Child, Preschool , Female , Humans , Male , Middle Aged , Young Adult , DNA, Viral/analysis , HTLV-I Infections/virology , Human T-lymphotropic virus 1/genetics , Lymphoma, T-Cell, Cutaneous/virology , Mycosis Fungoides/virology , Skin Neoplasms/virology , Biopsy , Case-Control Studies , HTLV-I Infections/pathology , Immunohistochemistry , Lymphoma, T-Cell, Cutaneous/pathology , Mycosis Fungoides/pathology , Polymerase Chain Reaction , Retrospective Studies , Skin Neoplasms/pathology
14.
Rio de Janeiro; s.n; 2013. xviii,128 p. ilus, graf, tab.
Thesis in Portuguese | LILACS | ID: lil-751641

ABSTRACT

O vírus linfotrópico para células T humanas (HTLV-1) é o principal agente causador da Paraparesia Espástica Tropical / Mielopatia associada ao HTLV-1 (PET/MAH) e da Leucemia da célula T do Adulto (LTA). [...]Fatores da interação HTLV-1/ hospedeiro estão envolvidos no risco de desenvolver doença. A lesão neurológica na PET/MAH parece ser consequência de uma reação inflamatória, desencadeada pelo reconhecimento de células infectadas por linfócitos T citotóxicos, com consequente liberação de citocinas e lesão medular. OBJETIVO: Identificar marcadores genéticos, que possam ajudar no prognóstico e tratamento dos pacientes portadores do HTLV-1. MÉTODOS: Nas amostras de 117 portadores do HTLV-1 assintomáticos e 171 pacientes com acometimento neurológico em acompanhamento na cidade do Rio de Janeiro, foram realizadas as tipificações dos genes do HLA Classe I e II, dos polimorfismos dos genes das citocinas -308TNF-α,-174IL-6, +874IFN-γ, códon 10 e 25TGF-β1 e -1082 - 819-592IL-10, e a quantificação da carga proviral. Os dados foram organizados em um banco de dados no programa SPSS. As frequências alélicas e genotípicas foram obtidas por contagem direta. O equilíbrio de Hardy-Weinberg foi avaliado para os polimorfismos das citocinas no sitio http://bioinfo.iconcologia.net/ubbweb/SNPStats_web, em relação ao HLA foram utilizadas as ferramentas disponíveis no sítio “Los Alamos HIV database tools”. As comparações entre os grupos foram realizadas através de tabelas de contingência 2x2 (quiquadrado, exato de Fisher e odds ratios), valores de p≤0,05 foram considerados significantes...


The human T cell lymphotropic vírus (HTLV-1) is the main causingagent of Tropical Spastic Paraparesis/HTLV-1 Associated Myelopathy (HAM/TSP) aswell as of Adult T Cell Leukemia (ATL). [...] Factorsrelated to the HTLV-1/host interaction may be involved in the risk of developing thediseases. The neurological lesion in HAM/TSP may be the consequence of aninflammatory reaction, triggered by the recognition of infected cells by cytotoxic Tlymphocytes, followed by the release of cytokines and central nervous system lesion.OBJECTIVE: This work aims to identify genetic markers, which may help in theprognosis and treatment of HTLV-1 patients. Methods: The polymorphism of the HLAClass I and II genes, as well as the TNF-α, IL6, IFN-γ, TGF-β and IL-10 cytokinegenes, and the proviral load were analysed in 117 asymptomatic HTLV-1 carriersand 171 HTLV-1 symptomatic carriers from Rio de Janeiro city. Data were organizedinto a database using SPSS. The Hardy-Weinberg equilibrium was evaluated forcytokine polimorphisms using the site http://bioinfo.iconcologia.net/ubbweb/SNPStats_web. The tools available in the site “Los Alamos HIV database tools” were used toanalyze the HLA polimorphisms. Comparisons between groups were made using 2x2contingency tables (Fisher Exact test/ χ2 and odds ratios), p values p≤0,05 wereconsidered significant...


Subject(s)
Humans , Cytokines/classification , Leukemia, T-Cell/diagnosis , Major Histocompatibility Complex , Paraparesis, Tropical Spastic , Human T-lymphotropic virus 1/genetics , Blotting, Western , Enzyme-Linked Immunosorbent Assay
15.
Rio de Janeiro; s.n; 2013. xv,114 p. ilus, graf, tab, mapas.
Thesis in Portuguese | LILACS | ID: lil-751644

ABSTRACT

Os efeitos da prática de exercícios sobre a funcionalidade de indivíduos com Paraparesia Espástica Tropical/Mielopatia Associada ao HTLV-1 (PET/MAH) são desconhecidos. O objetivo deste estudo é avaliar os efeitos de um Programa de Exercícios Domiciliares (PED) e a sua taxa de adesão em indivíduos com PET/MAH. Métodos: Vinte e três participantes com o diagnóstico de PET/MAH, marcha preservada e que não praticavam exercícios há pelo menos um mês foram submetidos ao PED de 20 semanas. Os desfechos primários incluíram os escores de força muscular, contração isométrica voluntária máxima (CIVM) e comprimento muscular dos membros inferiores, dor lombar e nos membros inferiores, EDSS, Escala de Incapacidade do IPEC, Índice de Barthel e SF-36. A taxa de adesão e os eventos adversos também foram mensurados e caracterizados. Resultados: No momento da análise os pacientes foram divididos em dois grupos de acordo com o teste Timed Up and Go (TUG) (<20s vs maior ou igual 20s). O comprimento dos músculos isquiotibiais e plantiflexores, a CIVM dos membros inferiores e o componente Aspectos Sociais da SF-36 apresentaram melhora significativa no grupo TUG <20s. Os indivíduos do grupo TUG maior ou igual 20s melhoraram significativamente o componente Capacidade Funcional da SF-36. A taxa de adesão foi de 90 por cento no total e os eventos adversos, como fadiga, dor muscular e caimbras foram de intensidade leve a moderada. Discussão: Foi observada uma boa adesão ao PED, além de melhora significativa da incapacidade e da qualidade de vida dos indivíduos com PET/MAH. É possível que o grupo TUG maior ou igual 20s apresente um maior componente neurodegenerativo e, portanto, uma menor probabilidade de incremento da funcionalidade. Conclusões: O PED foi eficaz em melhorar algumas incapacidades e a qualidade de vida dos indivíduos com PET/MAH...


The effect of exercises on functioning in Tropical Spastic Paraparesis/HTLV-1 Associated Myelopathy (TSP/HAM) individuals is unknown. This study aimed to investigate the effects of a home-based exercise program and its adherence in TSP/HAM individuals. Methods: Twenty-three TSP/HAM ambulators participants that did not practice any kind of exercise for at least one month were submitted to a 20-week home-based exercise program. Primary outcomes included lower limb muscular strength scores, maximum voluntary isometric contraction (MVIC) and muscle length, low back and lower limb pain, EDSS, IPEC Disability Scale, Barthel Index and SF-36. Adherence and adverse effects were also measured and characterized.Results: At analysis the participants were divided in two groups according to Timed Up and Go Test (TUG) (<20s vs greater than or equal to 20s). Muscle length of hamstrings and ankle flexors; hip flexors and total score of lower limb MVIC and the social functioning domain in SF-36 improved significantly in TUG <20s group. The individuals in the TUG greater than or equal to 20s group improved significantly the physical functioning domain in SF-36. The total adherence to the 20-weekhome-based exercise program was 90 percent. There were mild to moderate adverse events, like fatigue, muscle soreness and cramp. Discussion: There was a very good adherence to the home-based exercise program, besidesimprovements in disabilities and quality of life in TSP/HAM participants. It is possible that TUG greater than or equal to 20s group has a worse neurodegenerative component and then a lower probability tofunctioning increments. Conclusions: The home-based exercise program was effective in improving disabilities andquality of life in individuals with TSP/HAM. Those results reinforce the need for alternative strategies to face-to-face model that improve participation of these people to rehabilitationprograms...


Subject(s)
Humans , Muscle Stretching Exercises , Paraparesis, Tropical Spastic/physiopathology , Paraparesis, Tropical Spastic/transmission , Human T-lymphotropic virus 1/genetics
16.
Braz. j. infect. dis ; 16(4): 357-360, July-Aug. 2012. tab
Article in English | LILACS | ID: lil-645425

ABSTRACT

INTRODUCTION: Variations in human T cell lymphotropic virus type 1 (HTLV-1) proviral load (PVL) in infected individuals over time are not well understood. Objective: To evaluate the evolution of proviral load in asymptomatic individuals and HAM/TSP patients in order to help determine periodicity for measuring proviral load. METHODS: A group of 104 HTLV-1 infected patients, followed at the HTLV reference center in Salvador, Brazil, were included in the study (70 asymptomatic and 34 HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP) patients). HTLV-1 PVL was measured using real-time polymerase chain reaction (PCR) at baseline and again at another point, either < 12 months, between 12-24 months, or > 24 months. RESULTS: HAM/TSP patients had higher PVL (ranging from 11,041 to 317,009 copies/10(6) PBMC) when compared to asymptomatic individuals (ranging from 0 to 68,228 copies/10(6) PBMC). No statistically significant differences were observed in the medians of PVL in HAM/TSP patients or asymptomatic individuals over time. However, in asymptomatic individuals with a PVL below 50,000 copies/10(6) PBMC, a statistically significant two-fold increase was observed over time. CONCLUSION: HTLV-1-PVL remained stable in both asymptomatic individuals and HAM/TSP patients over time. Frequent monitoring of asymptomatic individuals with low PVLs is recommended and further studies should be conducted to assess the course of PVL in these patients over extended periods of time.


Subject(s)
Adult , Female , Humans , Male , Middle Aged , Young Adult , DNA, Viral/blood , HTLV-I Infections/virology , Human T-lymphotropic virus 1/physiology , Proviruses/physiology , Viral Load/physiology , Disease Progression , Human T-lymphotropic virus 1/genetics , Paraparesis, Tropical Spastic/virology , Proviruses/genetics , Real-Time Polymerase Chain Reaction , Retrospective Studies
17.
Rev. Inst. Med. Trop. Säo Paulo ; 54(3): 123-130, May-June 2012. ilus, graf
Article in English | LILACS | ID: lil-625271

ABSTRACT

The seroprevalence and geographic distribution of HTLV-1/2 among blood donors are extremely important to transfusion services. We evaluated the seroprevalence of HTLV-1/2 infection among first-time blood donor candidates in Ribeirão Preto city and region. From January 2000 to December 2010, 1,038,489 blood donations were obtained and 301,470 were first-time blood donations. All samples were screened with serological tests for HTLV-1/2 using enzyme immunoassay (EIA). In addition, the frequency of coinfection with hepatitis B virus (HBV), hepatitis C virus (HCV), human immunodeficiency virus (HIV), Chagas disease (CD) and syphilis was also determined. In-house PCR was used as confirmatory test for HTLV-1/2. A total of 296 (0.1%) first-time donors were serologically reactive for HTLV-1/2. Confirmatory PCR of 63 samples showed that 28 were HTLV-1 positive, 13 HTLV-2 positive, 19 negative and three indeterminate. Regarding HTLV coinfection rates, the most prevalent was with HBV (51.3%) and HCV (35.9%), but coinfection with HIV, CD and syphilis was also detected. The real number of HTLV-infected individual and coinfection rate in the population is underestimated and epidemiological studies like ours are very informative.


A soroprevalência e a distribuição geográfica do HTLV-1/2 entre os doadores de sangue são extremamente importantes para os serviços de transfusão. Neste trabalho, foi determinada a soroprevalência da infecção pelo HTLV-1/2 entre os doadores de sangue de primeira vez da cidade de Ribeirão Preto e região. No período de Janeiro de 2000 a Dezembro de 2010, 1.038.489 doações de sangue foram obtidas sendo 301.470 doações de primeira vez. Todas as amostras foram avaliadas com testes sorológicos para HTLV-1/2 usando ensaio imunoenzimático (EIA). Adicionalmente, a frequência de coinfecção com o vírus da hepatite B (HBV), vírus da hepatite C (HCV), vírus da imunodeficiência humana (HIV), doença de Chagas (CD) e sífilis também foi determinada. Adicionalmente, foi utilizada uma reação de PCR in-house como teste confirmatório para HTLV-1/2. Um total de 296 (0,1%) doadores de primeira vez foram sorologicamente reativos para HTLV-1/2. O PCR confirmatório de 63 amostras mostrou que 28 eram HTLV-1 positivas, 13 HTLV-2 positivas, 19 negativas e três indeterminadas. Em relação às taxas de coinfecção com HTLV1/2, a maior prevalência foi com HBV (51,3%) e HCV (35,9%), mas a coinfecção com HIV, CD e sífilis também foram detectadas. O número real de indivíduos infectados pelo HTLV-1 e a taxa de coinfecção na população é subestimado e estudos epidemiológicos como esse são muito informativos.


Subject(s)
Adolescent , Adult , Humans , Middle Aged , Young Adult , Blood Donors/statistics & numerical data , Coinfection/epidemiology , HTLV-I Infections/epidemiology , HTLV-II Infections/epidemiology , Brazil/epidemiology , Coinfection/diagnosis , HTLV-I Infections/diagnosis , HTLV-II Infections/diagnosis , Human T-lymphotropic virus 1/genetics , Human T-lymphotropic virus 1/immunology , /genetics , /immunology , Immunoenzyme Techniques , Polymerase Chain Reaction , Seroepidemiologic Studies
18.
Rev. Soc. Bras. Med. Trop ; 45(2): 159-162, Mar.-Apr. 2012. ilus, tab
Article in English | LILACS | ID: lil-625168

ABSTRACT

INTRODUCTION: Human T cell lymphotropic virus type 1 (HTLV-1) is endemic in the Caribbean, Japan, South America and regions of Africa. HTLV-2 is present in Native American populations and associated with IV drug use in Europe and North America. In Brazil, it is estimated that 1.5 million people are infected with HTLV-1/2. The study objective was to determine HTLV-1/2 prevalence in pregnant women in the prenatal care from three public services in São Luis, State of Maranhão, Brazil, and to counsel seropositive women to reduce viral transmission. METHODS: A cross-sectional study was conducted from February to December 2008; women with age of 18 to 45 years, with low risk for sexually transmitted disease (STD) were invited to participate. Blood samples were collected in filter paper, and HTLV-1/2 immunoenzymatic test (ELISA) was performed as a screening test. Women with reactive results were submitted to peripheral venous blood collection for ELISA repetition, followed by Western blot (WB) and real-time PCR to confirm and discriminate the infection between virus types 1 and 2. RESULTS: Of the 2,044 women tested, seven (0.3%) were ELISA reactive and confirmed positive (four were HTLV-1, and three were HTLV-2). All positive women were oriented not to breastfeed their newborns. CONCLUSIONS: This study showed that the virus is present in high prevalence in that population. Further studies covering other segments of the population are necessary to better characterize the presence of HTLV-1/2 in Maranhão and to elicit measures to prevent its spread.


INTRODUÇÃO: O vírus linfotrópico de células T humanas tipo 1 (HTLV-1) é endêmico no Caribe, Japão, América do sul e regiões da África. O HTLV-2 está presente em populações indígenas das Américas e usuários de drogas injetáveis na Europa e América do Norte. No Brasil, estimase que 1,5 milhões de pessoas estejam infectadas pelo HTLV-1/2. O objetivo deste estudo foi de determinar a prevalência do HTLV-1/2 em gestantes atendidas no pré-natal de três serviços públicos em São Luis, Maranhão, e orientar as mulheres soropositivas para reduzir a transmissão viral. MÉTODOS: Foi realizado um estudo transversal, de fevereiro a dezembro de 2008, com gestantes de 18 a 45 anos, com baixo risco de doença sexualmente transmissível (DST). Amostras de sangue foram coletadas em papel filtro e submetidas à técnica de ensaio imunoenzimático (ELISA) como teste de triagem para HTLV-1/2. As gestantes com resultado ELISA reativo foram submetidas à coleta de sangue venoso periférico para repetição do ELISA, seguido por WB e PCR em tempo real para confirmar e discriminar a infecção pelos tipos virais. RESULTADOS: Das 2.044 mulheres examinadas, sete (0.3%)tiveram resultados reativos e foram confirmadas soropositivas (quatro para HTLV-1 e três para HTLV-2). Todas as sete gestantes foram orientadas a não dar leite materno aos filhos. CONCLUSÕES: Este estudo mostrou que o HTLV-1/2 está presente em alta prevalência na população das mulheres grávidas estudadas. São necessários outros estudos contemplando diferentes segmentos populacionais para caracterizar a presença do HTLV-1/2 no Maranhão, e permitirmedidas preventivas contra a disseminação viral.


Subject(s)
Adolescent , Adult , Female , Humans , Infant, Newborn , Middle Aged , Pregnancy , Young Adult , HTLV-I Infections/epidemiology , HTLV-II Infections/epidemiology , Human T-lymphotropic virus 1 , Pregnancy Complications, Infectious/epidemiology , Blotting, Western , Brazil/epidemiology , Cross-Sectional Studies , Enzyme-Linked Immunosorbent Assay , HTLV-I Infections/diagnosis , HTLV-II Infections/diagnosis , Human T-lymphotropic virus 1/genetics , Human T-lymphotropic virus 1/immunology , /genetics , /immunology , Prevalence , Pregnancy Complications, Infectious/diagnosis , Pregnancy Complications, Infectious/virology , Real-Time Polymerase Chain Reaction , Socioeconomic Factors
19.
Rev. panam. salud pública ; 30(5): 422-430, nov. 2011. ilus, tab
Article in Spanish | LILACS | ID: lil-610068

ABSTRACT

OBJETIVO: Caracterizar el ambiente genómico de las secuencias adyacentes al virus linfotrópico humano de células T tipo 1 (HTLV-1) en pacientes con paraparesia espßstica tropical y mielopatía asociada a la infección con HTLV-1 (PET/MAH) de diferentes regiones de Colombia y del Japón. MÉTODOS: Se enfrentaron 71 clones recombinantes con secuencias del genoma humano adyacentes al 5'-LTR de pacientes con PET/MAH, a las bases de datos del Genome Browser y del Gen-Bank. Se identificaron y analizaron estadísticamente 16 variables genómicas estructurales y composicionales mediante el programa informßtico R, versión 2.8.1, en una ventana de 0,5 Mb. RESULTADOS: El 43,0 por ciento de los provirus se localizaron en los cromosomas del grupo C; 74 por ciento de las secuencias se ubicaron en regiones teloméricas y subteloméricas (P < 0,05). Un anßlisis de conglomerados permitió establecer las relaciones jerßrquicas entre las características genómicas incluidas en el estudio; el anßlisis de componentes principales identificó las componentes que definieron los ambientes genómicos preferidos para la integración proviral en casos de PET/MAH. CONCLUSIONES: El HTLV-1 se integró con mayor frecuencia en regiones de la cromatina ricas en islas de citocina fosfato guanina (CpG), de alta densidad de genes y de repeticiones tipo LINE (elemento disperso largo [long interspersed element]) y transposones de ADN que, en conjunto, conformarían los ambientes genómicos blanco de integración. Este nuevo escenario promoverß cambios sustanciales en el campo de la salud pública y en el manejo epidemiológico de las enfermedades infecciosas, y permitirß desarrollar potentes herramientas para incrementar la eficiencia de la vigilancia epidemiológica.


OBJECTIVE: Characterize the genomic environment of the sequences adjacent to human T-cell lymphotropic virus type 1 (HTLV-1) in patients with HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP) in different regions of Colombia and Japan. METHODS: A total of 71 recombinant clones with human genome sequences adjacent to 5' LTR in patients with HAM/TSP were compared to the Genome Browser and GenBank databases. Sixteen structural and compositional genome variables were identified, and statistical analysis was conducted in the R computer program, version 2.8.1, in a 0.5 Mb window. RESULTS: A total of 43.0 percent of the proviruses were located in the group C chromosomes; 74 percent of the sequences were located in the telomeric and subtelomeric regions (P < 0.05). A cluster analysis was used to establish the hierarchical relations between the genome characteristics included in the study. The analysis of principal components identified the components that defined the preferred genome environments for proviral integration in cases of HAM/TSP. CONCLUSIONS: HTLV-1 was integrated more often in chromatin regions rich in CpG islands with a high density of genes and LINE type repetitions, and DNA transposons which, overall, would form the genomic environments targeted for integration. This new scenario will promote substantial changes in the field of public health and in epidemiological management of infectious diseases. It will also foster the development of powerful tools for increasing the efficiency of epidemiological surveillance.


Subject(s)
Adult , Aged , Female , Humans , Male , Middle Aged , Genome, Human , Human T-lymphotropic virus 1/genetics , Paraparesis, Tropical Spastic/genetics , Proviruses/genetics , Terminal Repeat Sequences/genetics , Virus Integration/genetics , Chromosome Mapping , Chromosomes, Human/genetics , Colombia/epidemiology , CpG Islands , DNA, Recombinant/genetics , Paraparesis, Tropical Spastic/epidemiology , Paraparesis, Tropical Spastic/virology , Retroelements/genetics , Sequence Alignment , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid
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